Scientist, Chemistry

Warp Sciences

San Francisco Bay Area0–3 yrs1h agovia LinkedIn

About the Role

Warp Sciences is seeking a Scientist to join their Medicinal Chemistry group and contribute directly to client drug discovery programs. This role involves designing and executing multi-step organic syntheses, proposing and evaluating synthetic routes, and generating high-quality compounds and data. The position plays a key part in the company's automation mission by generating data for machine learning models and collaborating with AI scientists and roboticists to translate synthetic know-how into automated platforms.

Key Responsibilities

  • Design, plan, and execute multi-step organic synthesis of target compounds for client medicinal chemistry and hit-to-lead/lead optimization programs.
  • Propose and evaluate synthetic routes, including retrosynthetic analysis, pathway selection, and identification of scalable, cost-effective alternatives.
  • Perform reaction optimization (yield, selectivity, purity, scalability) and troubleshoot synthetic problems using mechanistic reasoning.
  • Purify and characterize intermediates and final compounds using techniques such as column chromatography, prep-HPLC, recrystallization, and analytical methods including LCMS, NMR, HPLC, and HRMS.
  • Accurately and promptly record experimental procedures, observations, and results in electronic laboratory notebooks (ELN).
  • Support scale-up of key intermediates and final compounds.
  • Communicate progress, data, and route strategy clearly to project leaders and, where applicable, to client scientists.
  • Generate structured experimental data suitable for machine learning and reaction-prediction models.
  • Partner with AI scientists and roboticists to translate synthetic routes and protocols into procedures executable on automated/robotic synthesis platforms.
  • Provide feedback on automated workflows (liquid handling, automated reaction setup, in-line analytics) and troubleshoot discrepancies between manual and automated execution.
  • Support iterative improvement of self-driving lab and automated chemistry capabilities.
  • Maintain compliance with laboratory safety protocols, chemical hygiene procedures, and proper handling/disposal of hazardous materials.
  • Manage time and priorities effectively across multiple concurrent projects and client deadlines.
  • Contribute to continuous improvement of synthetic methods, workflows, and best practices.

Requirements & Tech Stack

  • B.S. or M.S. in Chemistry, Organic Chemistry, Medicinal Chemistry, or a related discipline.
  • 0–3 years of relevant synthetic organic chemistry experience (industry, CRO, or advanced academic/graduate research); internship or co-op experience considered for entry-level candidates.
  • Demonstrated hands-on experience with multi-step organic synthesis and standard purification techniques.
  • Working knowledge of retrosynthetic analysis and route design principles.
  • Proficiency interpreting spectroscopic and analytical data (NMR, LCMS, HPLC).
  • Solid understanding of laboratory safety practices and safe handling of reactive/hazardous chemicals.
  • Strong record-keeping and documentation habits; experience with ELN systems is a plus.
  • Excellent organizational skills with the ability to manage multiple projects and shifting priorities in a deadline-driven environment.
  • Effective written and verbal communication skills.

Preferred Qualifications

  • Prior CRO, pharmaceutical, or biotech industry experience supporting drug discovery programs.
  • Experience with parallel synthesis, medicinal chemistry SAR exploration, or DMPK-informed compound design.
  • Familiarity with chemistry software tools (e.g., ChemDraw, electronic notebooks, reaction database/search tools).
  • Experience with air- and moisture-sensitive chemistry, flow chemistry, or automated/robotic synthesis platforms.
  • Interest or prior experience in AI/ML-driven chemistry, cheminformatics, or self-driving laboratory concepts.
  • Comfort working with structured data entry.
  • Track record of authorship or contribution to publications, patents, or internal technical reports.

Work Environment / Physical Requirements

  • Primarily laboratory-based role requiring extended periods standing at the bench and working with standard synthetic chemistry equipment.
  • Regular exposure to laboratory chemicals, solvents, and reagents; strict adherence to PPE and safety protocols is required.
  • Ability to lift and move laboratory supplies and equipment (up to approximately 25 lbs).

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