Bioinformatics Software Engineer
Integrated Resources, Inc ( IRI )
Foster City, CA0–3 yrs2h agovia LinkedIn
This job at a glance
- Who can apply
- New grads and up to 3 years · Bachelor's degree
- Must know
- FastAPIREST APIsPythonSQLNoSQLJavaScript
- Work
- On-site in Foster City
- Pay
- Not stated by the employer.
- Skill demand
- Python59%REST APIs40%SQL34%FastAPI3%of 149 similar entry-level jobs posted in the US this week
- Listed
- Nov 5, 2026 · still open
Sign in free to see which of these skills your resume already shows.
About the Role
Client is seeking a highly motivated Bioinformatics Software Engineer to contribute to the development of a next-generation computational platform for antibody-based therapeutic design and assessment. This contractor role will focus on building scalable software infrastructure, automated scientific workflows, data management, and interactive visualization.
Key Responsibilities
- Design and implement scalable, web-based interfaces for computational biophysics and antibody design workflows.
- Develop and optimize database schemas to manage scientific data, computational results, and associated metadata.
- Build and maintain FastAPI-based backend services and APIs supporting computational workflows.
- Develop and orchestrate automated scientific pipelines using tools such as Nextflow, containers, and SLURM.
- Build software connecting databases, computational pipelines, APIs, and interactive visualization tools.
- Use modern AI-assisted development and vibe-coding approaches to rapidly prototype, test, and iterate on scientific applications.
- Ensure code quality through modular design, version control, testing, documentation, and maintainability.
- Support platform deployment and testing in HPC and cloud-based environments.
Requirements & Tech Stack
- Strong proficiency in Python and scientific software development.
- Hands-on experience with FastAPI, SQL/NoSQL databases, and database design.
- Experience developing and orchestrating automated computational pipelines, preferably using Nextflow or similar workflow frameworks.
- Experience with HPC environments and workload schedulers such as SLURM.
- Strong front-end development and data visualization skills, such as React, JavaScript, HTML/CSS, or equivalent technologies.
- Experience with Git, containerization technologies such as Docker, and modern software development practices.
- Experience with cloud platforms such as AWS or GCP.
- Excellent communication and collaboration skills within multidisciplinary scientific teams.
Qualifications
- Bachelor’s or Master’s degree in Computer Science, Bioinformatics, Computational Biology, Physics, or a related field. PhD candidates are also welcome to apply.
Preferred Qualifications:
- Familiarity with protein structure, antibody design, molecular modeling, or structure-based computational methods.
- Familiarity with molecular modeling or protein structure tools such as MOE, Schrödinger, or equivalent.
- Experience applying AI-assisted coding tools to accelerate scientific software development and prototyping.
- Knowledge of antibody developability or biologics discovery workflows.
- Prior experience in biotech or pharmaceutical industry settings.